Commits · dc075a15c6428ab6ce17aeb48430326c3893188a · CCD-public / Nanopore

May 15, 2025
- Merge branch 'dev/containers' into 'main' · dc075a15
  Carlos Gomes authored May 15, 2025
  dc075a15
May 08, 2025
- up: dorado, modkit, multiQC and pycoQC (duceppemo fork); fix: container... · 68f9c5a0
  João Henrique Chrusciel authored May 03, 2025
  68f9c5a0
Apr 25, 2025
- Merge branch 'fix/style' into 'main' · 08a45a72
  Carlos Gomes authored Apr 25, 2025
  08a45a72
- Merge branch 'main' into 'fix/style' · b14c3f6f
  Carlos Gomes authored Apr 25, 2025
  b14c3f6f
- fix: module flows and script, fix indent and spacing · 1dfebfb2
  Carlos Gomes authored Apr 25, 2025
  
  1dfebfb2
- fix: subflows indent and spacing · 1ff43043
  Carlos Gomes authored Apr 25, 2025
  
  1ff43043
- fix: nextflow line breaks and comments · cbeac104
  Carlos Gomes authored Apr 25, 2025
  
  cbeac104
- fix: nextflow indents and line breaks · c15c34c3
  Carlos Gomes authored Apr 25, 2025
  
  c15c34c3
Apr 24, 2025
- up: style fix · 87d1f3a0
  Gabriela Federhen de Carvalho authored Apr 24, 2025
  87d1f3a0
Apr 17, 2025
- up: doc and container definition · 75ede467
  Carlos Gomes authored Apr 17, 2025
  75ede467
- up: ignore IDEs · 87d310dc
  Carlos Gomes authored Apr 17, 2025
  
  87d310dc
- up: make .gz ignore .fa.gz as well · d58ee0c1
  Carlos Gomes authored Apr 17, 2025
  
  d58ee0c1
- fix: export apptainer cache dir · 447e925f
  Carlos Gomes authored Apr 17, 2025
  
  447e925f
- Merge branch 'fix/doc' into 'main' · 1cb5565b
  Carlos Gomes authored Apr 17, 2025
  1cb5565b
- Merge branch 'fix/ignores' into 'main' · dd7170a2
  Carlos Gomes authored Apr 17, 2025
  dd7170a2
- rm: remove bogus license and erroneous citations · badddcaa
  Carlos Gomes authored Apr 17, 2025
  
  badddcaa
- up: @carlosgomes refactored original doc · f8b73335
  Carlos Gomes authored Apr 17, 2025
  
  f8b73335
- add: default ignores · c4880bb9
  Carlos Gomes authored Apr 17, 2025
  
  c4880bb9
Oct 20, 2024
- Updated MODKIT module with new parameters to consume less memory · 33378783
  João Henrique Chrusciel authored Oct 20, 2024
  
  33378783
Oct 18, 2024
- updated container · 46c8efdd
  João Henrique Chrusciel authored Oct 18, 2024
  
  46c8efdd
- updated modkit memory usag and debugging messages · c7922981
  João Henrique Chrusciel authored Oct 18, 2024
  
  c7922981
Aug 01, 2024
- Update README.md · 7467407c
  Bernardo Aguzzoli Heberle authored Aug 01, 2024
  
  7467407c
- Update README.md · ab765819
  Bernardo Aguzzoli Heberle authored Aug 01, 2024
  
  ab765819
- update · 439ed91f
  Bernardo Aguzzoli Heberle authored Aug 01, 2024
  
  439ed91f
- update · a0ef6ee5
  Bernardo Aguzzoli Heberle authored Aug 01, 2024
  
  a0ef6ee5
Jul 26, 2024
- Added barcode option for step 2 · 4eb3da4b
  Bernardo Aguzzoli Heberle authored Jul 26, 2024
  
  4eb3da4b
- Update README.md · a6997061
  Bernardo Aguzzoli Heberle authored Jul 26, 2024
  
  a6997061
- update · 314d3703
  Bernardo Aguzzoli Heberle authored Jul 26, 2024
  
  314d3703
- update · 159b17a2
  Bernardo Aguzzoli Heberle authored Jul 26, 2024
  
  159b17a2
Jul 24, 2024
- Update README.md · da46e046
  Bernardo Aguzzoli Heberle authored Jul 24, 2024
  
  da46e046
- update · a3001071
  Bernardo Aguzzoli Heberle authored Jul 24, 2024
  
  a3001071
May 21, 2024
- Update basecall.nf · 3b3af29a
  Bernardo Aguzzoli Heberle authored May 21, 2024
  
  3b3af29a
Mar 22, 2024
- update · fe8e7095
  bernardo-heberle authored Mar 22, 2024
  
  fe8e7095
- Update README.md · 4022379b
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  4022379b
- Update CITATIONS.md · 1a4ae6b6
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  1a4ae6b6
- Add files via upload · 9acc7ba4
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  9acc7ba4
- Update README.md · fd32f497
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  fd32f497
- Update README.md · c33b0a7e
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  c33b0a7e
- Update README.md · 46504cf0
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  46504cf0
- Update README.md · 72c5c98f
  Bernardo Aguzzoli Heberle authored Mar 22, 2024
  
  72c5c98f