Commits · 978379f38f57b870b7903a7051f6faa9162b6620 · CCD-public / PycoQC

Apr 03, 2020
- Made Fast5_to_seq_summary work on multi-fast5 files · 978379f3
  Rene Snajder authored Apr 03, 2020
  
  978379f3
Mar 06, 2020
- Merge pull request #114 from a-slide/dev · b40e6c12
  Adrien Leger authored Mar 06, 2020
  b40e6c12
- Update version number · 13011dc2
  a-slide authored Mar 06, 2020
  
  13011dc2
- Improve conda deployment · a301ca45
  a-slide authored Mar 06, 2020
  
  a301ca45
- update doc · 84e8d18d
  a-slide authored Mar 06, 2020
  
  84e8d18d
- Improve installation instructions · c079d3c8
  a-slide authored Mar 06, 2020
  
  c079d3c8
Feb 10, 2020
- Merge pull request #110 from a-slide/dev · b035a016
  Adrien Leger authored Feb 10, 2020
  b035a016
- Add additionnal data to json report for MultiQC integration · e2117307
  a-slide authored Feb 10, 2020
  
  e2117307
Jan 09, 2020
- Merge pull request #109 from a-slide/dev · 7a9077c6
  Adrien Leger authored Jan 09, 2020
  7a9077c6
- Fix notebook format issue and bump up version num · 2367a6b0
  a-slide authored Jan 09, 2020
  
  2367a6b0
- Bump up version num · 0ae6ba12
  a-slide authored Jan 09, 2020
  
  0ae6ba12
- Update tests and doc · 7c329a84
  a-slide authored Jan 09, 2020
  
  7c329a84
- Style cleanup · cb68d267
  a-slide authored Jan 09, 2020
  
  cb68d267
- can create outdir if they do not exist yet · 476cd91b
  a-slide authored Jan 09, 2020
  
  476cd91b
Nov 07, 2019
- Merge pull request #104 from a-slide/dev · 8f9e7b00
  Adrien Leger authored Nov 07, 2019
  8f9e7b00
- Bump up version num · 37bdaf2c
  a-slide authored Nov 07, 2019
  
  37bdaf2c
- Codacity style and security update · 3dd9953e
  a-slide authored Nov 07, 2019
  
  3dd9953e
- Bump up version num · 80af626b
  a-slide authored Nov 07, 2019
  
  80af626b
- Update doc and tests · 3c870958
  a-slide authored Nov 07, 2019
  
  3c870958
- Update summary table functions and split into 3 Run, Basecall and align · 960535e4
  a-slide authored Nov 07, 2019
  
  960535e4
Oct 26, 2019
- Merge pull request #103 from a-slide/dev · ff28aa48
  Adrien Leger authored Oct 26, 2019
  ff28aa48
- Bump up version number · 0eed314b
  a-slide authored Oct 26, 2019
  
  0eed314b
- Update doc · 2b18f772
  a-slide authored Oct 26, 2019
  
  2b18f772
- Reformat over time functions + add alignment len and identity over time · e096d42e
  a-slide authored Oct 26, 2019
  
  e096d42e
- Remove results data · 7da13466
  a-slide authored Oct 26, 2019
  
  7da13466
Oct 11, 2019
- Merge pull request #100 from a-slide/dev · 41820669
  Adrien Leger authored Oct 12, 2019
  41820669
- Bump up version number · fc69d5bd
  a-slide authored Oct 12, 2019
  
  fc69d5bd
- Add len pass filter · c544274b
  a-slide authored Oct 12, 2019
  
  c544274b
- Update pycoQC usage to include BAM info · 2fc24dcb
  a-slide authored Oct 12, 2019
  
  2fc24dcb
- Fix broken links · 53b3c565
  a-slide authored Oct 12, 2019
  
  53b3c565
- Update notebooks and output reports · 4c5c74b8
  a-slide authored Oct 12, 2019
  
  4c5c74b8
- Add min_pass_len option to specify a minimal read length to be "pass" · f971b805
  a-slide authored Oct 11, 2019
  
  f971b805
Oct 10, 2019
- Merge pull request #99 from a-slide/dev · 9a301422
  Adrien Leger authored Oct 10, 2019
  9a301422
- Bump up version number · cf6922cc
  a-slide authored Oct 10, 2019
  
  cf6922cc
- Fix broken paths · 5bf6b411
  a-slide authored Oct 10, 2019
  
  5bf6b411
- Merge pull request #98 from a-slide/dev · cd6fbf50
  Adrien Leger authored Oct 10, 2019
  cd6fbf50
- Bump up version number · ab91d0ec
  a-slide authored Oct 10, 2019
  
  ab91d0ec
- file name list now contain absolute paths · 53faecd1
  a-slide authored Oct 10, 2019
  
  53faecd1
- Fix synthax error in Fast5_to_seq_summary · 6ceda601
  a-slide authored Oct 10, 2019
  
  6ceda601
- Change align_score for identity frequency · 1bbb66e9
  a-slide authored Oct 10, 2019
  
  1bbb66e9