modules/bambu.nf

modules/basecall.nf

modules/chm13_gff3_to_gtf.nf

modules/contamination.nf

modules/convert_U_to_T.nf

modules/gffcompare.nf

modules/make_contamination_report.nf

modules/make_fai.nf

modules/make_index.nf

modules/make_transcriptome.nf

modules/minimap2.nf

modules/multiqc.nf

modules/num_reads_report.nf

modules/pychopper.nf

modules/pycoqc.nf

modules/rseqc.nf

modules/trim_dRNA.nf

modules/unzip_and_concatenate.sh

singularity_containers/2023-12-21_ont_methylation.def

singularity_containers/README.md