From 8fd54d80d3abe79808254ab0a29859f0aaf7c82e Mon Sep 17 00:00:00 2001 From: Mau Magnaguagno Date: Fri, 27 Jun 2025 15:57:39 -0300 Subject: [PATCH] up: README.md apptainer build and src folder. --- README.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 5b85206..27f42ac 100755 --- a/README.md +++ b/README.md @@ -70,8 +70,9 @@ NextFlow pipeline used by the Developmental Cognitive Neuroscience Lab (DCNL) to images/debian-nanopore.sif \ containers/debian-nanopore.def ``` + If the container build fails due to size, it may be related to limitations in the **tmp/** folder, change it with ``export APPTAINER_TMPDIR="path/"``. See [documentation](https://apptainer.org/docs/user/1.0/build_env.html#temporary-folders) for details. -1. You should now be able to run the `nextflow` pipeline (`workflow/main.nf`). See [Pipeline parameters](#pipeline-parameters) and [Examples](#examples) for details. +1. You should now be able to run the `nextflow` pipeline (`src/main.nf`). See [Pipeline parameters](#pipeline-parameters) and [Examples](#examples) for details. [openjava]:https://openjdk.org/install/ [oraclejava]:https://www.java.com/en/download/linux_manual.jsp -- GitLab